Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
VcanQ62059 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.84□□□□□ -0.19
VcanQ62059 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VcanQ62059 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VcanQ62059 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.83□□□□□ -0.19
VcanQ62059 AU022133-201ENSMUST00000200601 873 ntBASIC13.83□□□□□ -0.19
VcanQ62059 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VcanQ62059 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VcanQ62059 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VcanQ62059 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VcanQ62059 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Gm27514-201ENSMUST00000183692 110 ntBASIC13.83□□□□□ -0.2
VcanQ62059 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.83□□□□□ -0.2
VcanQ62059 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.83□□□□□ -0.2
VcanQ62059 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.83□□□□□ -0.2
VcanQ62059 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VcanQ62059 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Gm24514-201ENSMUST00000174961 285 ntBASIC13.82□□□□□ -0.2
VcanQ62059 Gm9182-201ENSMUST00000217829 639 ntBASIC13.82□□□□□ -0.2
VcanQ62059 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Gm9823-201ENSMUST00000051212 327 ntBASIC13.82□□□□□ -0.2
VcanQ62059 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
VcanQ62059 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.82□□□□□ -0.2
VcanQ62059 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VcanQ62059 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VcanQ62059 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.82□□□□□ -0.2
VcanQ62059 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcanQ62059 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.82□□□□□ -0.2
VcanQ62059 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.82□□□□□ -0.2
VcanQ62059 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VcanQ62059 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Gm43118-201ENSMUST00000199149 775 ntBASIC13.81□□□□□ -0.2
VcanQ62059 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.81□□□□□ -0.2
VcanQ62059 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.81□□□□□ -0.2
VcanQ62059 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.81□□□□□ -0.2
VcanQ62059 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
VcanQ62059 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Gm5354-201ENSMUST00000182417 973 ntBASIC13.81□□□□□ -0.2
VcanQ62059 Gm19309-201ENSMUST00000218295 205 ntBASIC13.81□□□□□ -0.2
VcanQ62059 Gm45930-201ENSMUST00000221330 292 ntBASIC13.81□□□□□ -0.2
VcanQ62059 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.81□□□□□ -0.2
VcanQ62059 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.81□□□□□ -0.2
VcanQ62059 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcanQ62059 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Gm27501-201ENSMUST00000183599 107 ntBASIC13.8□□□□□ -0.2
VcanQ62059 Gm18307-201ENSMUST00000206864 949 ntBASIC13.8□□□□□ -0.2
VcanQ62059 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.8□□□□□ -0.2
VcanQ62059 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
VcanQ62059 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VcanQ62059 Gm44608-201ENSMUST00000206827 855 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms