Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Rai1Q61818 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rai1Q61818 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rai1Q61818 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rai1Q61818 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rai1Q61818 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.25□□□□□ -0.13
Rai1Q61818 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.25□□□□□ -0.13
Rai1Q61818 Gm12091-201ENSMUST00000146791 830 ntBASIC14.25□□□□□ -0.13
Rai1Q61818 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.25□□□□□ -0.13
Rai1Q61818 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.25□□□□□ -0.13
Rai1Q61818 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.25□□□□□ -0.13
Rai1Q61818 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.25□□□□□ -0.13
Rai1Q61818 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.25□□□□□ -0.13
Rai1Q61818 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.25□□□□□ -0.13
Rai1Q61818 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.25□□□□□ -0.13
Rai1Q61818 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rai1Q61818 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rai1Q61818 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rai1Q61818 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.24□□□□□ -0.13
Rai1Q61818 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Rai1Q61818 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.24□□□□□ -0.13
Rai1Q61818 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rai1Q61818 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rai1Q61818 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Gm25857-201ENSMUST00000082788 129 ntBASIC14.24□□□□□ -0.13
Rai1Q61818 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rai1Q61818 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rai1Q61818 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rai1Q61818 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rai1Q61818 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.23□□□□□ -0.13
Rai1Q61818 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.23□□□□□ -0.13
Rai1Q61818 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.23□□□□□ -0.13
Rai1Q61818 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.23□□□□□ -0.13
Rai1Q61818 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.23□□□□□ -0.13
Rai1Q61818 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.23□□□□□ -0.13
Rai1Q61818 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Rai1Q61818 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rai1Q61818 BC001981-202ENSMUST00000191393 1545 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms