Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox17Q61473 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm10013-201ENSMUST00000106074 672 ntBASIC14.05□□□□□ -0.16
Sox17Q61473 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm12008-201ENSMUST00000117791 755 ntBASIC14.05□□□□□ -0.16
Sox17Q61473 Gm13312-201ENSMUST00000119631 718 ntBASIC14.05□□□□□ -0.16
Sox17Q61473 Gm15794-201ENSMUST00000120182 631 ntBASIC14.05□□□□□ -0.16
Sox17Q61473 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.05□□□□□ -0.16
Sox17Q61473 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox17Q61473 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox17Q61473 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm19164-201ENSMUST00000210667 640 ntBASIC14.05□□□□□ -0.16
Sox17Q61473 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox17Q61473 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox17Q61473 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.05□□□□□ -0.16
Sox17Q61473 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox17Q61473 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Sox17Q61473 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox17Q61473 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox17Q61473 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.04□□□□□ -0.16
Sox17Q61473 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox17Q61473 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox17Q61473 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox17Q61473 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Sox17Q61473 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sox17Q61473 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox17Q61473 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Gm9013-201ENSMUST00000132939 882 ntBASIC14.03□□□□□ -0.16
Sox17Q61473 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox17Q61473 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox17Q61473 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox17Q61473 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox17Q61473 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox17Q61473 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.02□□□□□ -0.16
Sox17Q61473 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Sox17Q61473 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox17Q61473 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms