Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.12■□□□□ 0.33
Scnn1aQ61180 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Gm13453-201ENSMUST00000118708 357 ntBASIC17.12■□□□□ 0.33
Scnn1aQ61180 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Gm27306-201ENSMUST00000183970 107 ntBASIC17.12■□□□□ 0.33
Scnn1aQ61180 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scnn1aQ61180 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.11■□□□□ 0.33
Scnn1aQ61180 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scnn1aQ61180 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.1■□□□□ 0.33
Scnn1aQ61180 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Gm17837-201ENSMUST00000186435 985 ntBASIC17.1■□□□□ 0.33
Scnn1aQ61180 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Olfr286-202ENSMUST00000205305 969 ntBASIC17.1■□□□□ 0.33
Scnn1aQ61180 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Gm6888-201ENSMUST00000221983 706 ntBASIC17.1■□□□□ 0.33
Scnn1aQ61180 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scnn1aQ61180 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms