Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.25□□□□□ -0.13
Nr1h4Q60641 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.25□□□□□ -0.13
Nr1h4Q60641 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1h4Q60641 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nr1h4Q60641 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Gm27867-201ENSMUST00000184778 125 ntBASIC14.23□□□□□ -0.13
Nr1h4Q60641 Gm7506-201ENSMUST00000207758 815 ntBASIC14.23□□□□□ -0.13
Nr1h4Q60641 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nr1h4Q60641 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.22□□□□□ -0.13
Nr1h4Q60641 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms