Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm22189-201ENSMUST00000103822 86 ntBASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Mir7085-201ENSMUST00000184353 66 ntBASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc88aQ5SNZ0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc88aQ5SNZ0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 AY702102-202ENSMUST00000194651 1173 ntBASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm42612-201ENSMUST00000197986 623 ntBASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Gm43170-201ENSMUST00000199827 612 ntBASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc88aQ5SNZ0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc88aQ5SNZ0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Gm9063-201ENSMUST00000223299 582 ntBASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc88aQ5SNZ0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms