Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Gm14701-201ENSMUST00000117156 348 ntBASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav2Q5R1I9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Rpph1-201ENSMUST00000175096 319 ntBASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav2Q5R1I9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Gm11745-201ENSMUST00000121669 448 ntBASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Gm8396-201ENSMUST00000057361 823 ntBASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 App-207ENSMUST00000227737 2827 ntBASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms