Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Gm15806-201ENSMUST00000120696 955 ntBASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Mir6392-201ENSMUST00000184924 108 ntBASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Gm19220-201ENSMUST00000222682 803 ntBASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav8d-2Q5R1B6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Gm21854-201ENSMUST00000179901 471 ntBASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Gm10766-202ENSMUST00000194123 606 ntBASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav8d-2Q5R1B6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-2Q5R1B6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms