Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lins1Q3U1D0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Gm2810-201ENSMUST00000118681 990 ntBASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Gm15693-201ENSMUST00000120470 637 ntBASIC17.75■□□□□ 0.43
Lins1Q3U1D0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lins1Q3U1D0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm11543-201ENSMUST00000120758 370 ntBASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm18737-201ENSMUST00000173594 937 ntBASIC17.74■□□□□ 0.43
Lins1Q3U1D0 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lins1Q3U1D0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Gm27622-201ENSMUST00000183779 60 ntBASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Lins1Q3U1D0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms