Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm14140-201ENSMUST00000119999 995 ntBASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm12134-201ENSMUST00000122109 520 ntBASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm5177-201ENSMUST00000183092 997 ntBASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctdnep1Q3TP92 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctdnep1Q3TP92 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Gm1401-201ENSMUST00000122048 772 ntBASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctdnep1Q3TP92 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.21■□□□□ 0.34
Ctdnep1Q3TP92 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ctdnep1Q3TP92 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctdnep1Q3TP92 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms