Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Gm25927-201ENSMUST00000175058 117 ntBASIC12.34□□□□□ -0.43
Trim63Q38HM4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim63Q38HM4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.34□□□□□ -0.43
Trim63Q38HM4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim63Q38HM4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim63Q38HM4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trim63Q38HM4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.33□□□□□ -0.44
Trim63Q38HM4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gm5408-201ENSMUST00000197998 747 ntBASIC12.33□□□□□ -0.44
Trim63Q38HM4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.33□□□□□ -0.44
Trim63Q38HM4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim63Q38HM4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.32□□□□□ -0.44
Trim63Q38HM4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gm23547-201ENSMUST00000158210 271 ntBASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gm17661-201ENSMUST00000170317 270 ntBASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.32□□□□□ -0.44
Trim63Q38HM4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms