Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 AC174797.2-202ENSMUST00000225729 568 ntBASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ush2AQ2QI47 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm15370-201ENSMUST00000117158 253 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm11524-201ENSMUST00000119349 807 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm14208-201ENSMUST00000119645 678 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm19208-201ENSMUST00000213861 912 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm12715-201ENSMUST00000121430 1128 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 AC192088.1-201ENSMUST00000227561 301 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Zcchc6-207ENSMUST00000225576 2499 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm4271-201ENSMUST00000174444 973 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Gm4804-201ENSMUST00000182234 999 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC7.79□□□□□ -1.16
Ush2AQ2QI47 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Gm44397-201ENSMUST00000195950 113 ntBASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 AC154176.1-201ENSMUST00000225897 220 ntBASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Gm37489-201ENSMUST00000191883 159 ntBASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC7.78□□□□□ -1.16
Ush2AQ2QI47 AC160980.1-201ENSMUST00000224136 970 ntBASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ush2AQ2QI47 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms