Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx3-2P97503 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx3-2P97503 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx3-2P97503 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx3-2P97503 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx3-2P97503 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx3-2P97503 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx3-2P97503 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Gm8396-201ENSMUST00000057361 823 ntBASIC14.13□□□□□ -0.15
Nkx3-2P97503 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx3-2P97503 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.12□□□□□ -0.15
Nkx3-2P97503 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.12□□□□□ -0.15
Nkx3-2P97503 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx3-2P97503 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.11□□□□□ -0.15
Nkx3-2P97503 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.11□□□□□ -0.15
Nkx3-2P97503 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx3-2P97503 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx3-2P97503 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms