Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Gm22189-201ENSMUST00000103822 86 ntBASIC18.61■□□□□ 0.57
Smarcc1P97496 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Smarcc1P97496 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcc1P97496 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcc1P97496 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Celf4-206ENSMUST00000224553 1729 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarcc1P97496 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm3436-201ENSMUST00000179930 840 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm29310-201ENSMUST00000185468 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21825-201ENSMUST00000185728 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm29109-201ENSMUST00000185895 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21896-201ENSMUST00000186520 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21873-201ENSMUST00000186728 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21794-201ENSMUST00000187056 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21880-201ENSMUST00000187275 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21826-201ENSMUST00000187451 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21198-201ENSMUST00000188393 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21749-201ENSMUST00000189343 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21901-201ENSMUST00000189568 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm29424-201ENSMUST00000189716 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm28599-201ENSMUST00000189838 694 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21867-201ENSMUST00000189917 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm29269-201ENSMUST00000190087 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21722-201ENSMUST00000190153 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm28423-201ENSMUST00000190701 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21899-201ENSMUST00000190745 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21910-201ENSMUST00000191163 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21849-201ENSMUST00000191571 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm28678-201ENSMUST00000191593 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm20910-201ENSMUST00000193268 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm21871-201ENSMUST00000194621 696 ntBASIC18.6■□□□□ 0.57
Smarcc1P97496 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcc1P97496 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcc1P97496 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcc1P97496 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcc1P97496 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcc1P97496 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smarcc1P97496 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.59■□□□□ 0.57
Smarcc1P97496 Dancr-204ENSMUST00000132389 2347 ntBASIC18.59■□□□□ 0.57
Smarcc1P97496 Gm6222-201ENSMUST00000120787 396 ntBASIC18.59■□□□□ 0.57
Smarcc1P97496 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.59■□□□□ 0.57
Smarcc1P97496 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcc1P97496 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcc1P97496 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.58■□□□□ 0.57
Smarcc1P97496 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.58■□□□□ 0.57
Smarcc1P97496 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcc1P97496 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smarcc1P97496 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms