Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Npas1P97459 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Gm27389-201ENSMUST00000183622 195 ntBASIC12.56□□□□□ -0.4
Npas1P97459 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.56□□□□□ -0.4
Npas1P97459 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Npas1P97459 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.56□□□□□ -0.4
Npas1P97459 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Npas1P97459 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Npas1P97459 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Npas1P97459 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.55□□□□□ -0.4
Npas1P97459 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Npas1P97459 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.55□□□□□ -0.4
Npas1P97459 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Npas1P97459 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Npas1P97459 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Npas1P97459 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.54□□□□□ -0.4
Npas1P97459 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Npas1P97459 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Mir770-201ENSMUST00000103252 94 ntBASIC12.54□□□□□ -0.4
Npas1P97459 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Npas1P97459 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.54□□□□□ -0.4
Npas1P97459 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Npas1P97459 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Npas1P97459 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms