Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm44344-201ENSMUST00000200287 129 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm9908-201ENSMUST00000211534 448 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm9257-201ENSMUST00000221254 232 ntBASIC13.78□□□□□ -0.2
Cacna1aP97445 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cacna1aP97445 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cacna1aP97445 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cacna1aP97445 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cacna1aP97445 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cacna1aP97445 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.77□□□□□ -0.21
Cacna1aP97445 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cacna1aP97445 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cacna1aP97445 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.77□□□□□ -0.21
Cacna1aP97445 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.77□□□□□ -0.21
Cacna1aP97445 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cacna1aP97445 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cacna1aP97445 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.76□□□□□ -0.21
Cacna1aP97445 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Gm9719-201ENSMUST00000162765 543 ntBASIC13.76□□□□□ -0.21
Cacna1aP97445 Gm27838-201ENSMUST00000184829 128 ntBASIC13.76□□□□□ -0.21
Cacna1aP97445 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.76□□□□□ -0.21
Cacna1aP97445 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.76□□□□□ -0.21
Cacna1aP97445 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cacna1aP97445 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Syt7-204ENSMUST00000223586 1344 ntBASIC13.75□□□□□ -0.21
Cacna1aP97445 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms