Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm16026-204ENSMUST00000162652 683 ntBASIC16.24■□□□□ 0.19
Trim43cP86449 Thap2-203ENSMUST00000218989 527 ntBASIC16.24■□□□□ 0.19
Trim43cP86449 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Trim43cP86449 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43cP86449 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim43cP86449 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.23■□□□□ 0.19
Trim43cP86449 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Gm10175-201ENSMUST00000086013 645 ntBASIC16.23■□□□□ 0.19
Trim43cP86449 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim43cP86449 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43cP86449 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim43cP86449 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim43cP86449 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.22■□□□□ 0.19
Trim43cP86449 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Trim43cP86449 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim43cP86449 Gm20553-201ENSMUST00000204205 844 ntBASIC16.22■□□□□ 0.19
Trim43cP86449 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim43cP86449 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.22■□□□□ 0.19
Trim43cP86449 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.22■□□□□ 0.19
Trim43cP86449 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim43cP86449 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim43cP86449 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim43cP86449 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43cP86449 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim43cP86449 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trim43cP86449 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim43cP86449 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim43cP86449 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.21■□□□□ 0.19
Trim43cP86449 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim43cP86449 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Gm8749-201ENSMUST00000117737 331 ntBASIC16.21■□□□□ 0.19
Trim43cP86449 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim43cP86449 Gm27301-201ENSMUST00000184012 127 ntBASIC16.21■□□□□ 0.19
Trim43cP86449 Gm18206-201ENSMUST00000207027 926 ntBASIC16.21■□□□□ 0.19
Trim43cP86449 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim43cP86449 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43cP86449 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim43cP86449 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim43cP86449 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim43cP86449 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim43cP86449 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim43cP86449 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms