Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SgcaP82350 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SgcaP82350 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.56□□□□□ -0.4
SgcaP82350 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.56□□□□□ -0.4
SgcaP82350 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.56□□□□□ -0.4
SgcaP82350 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.56□□□□□ -0.4
SgcaP82350 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SgcaP82350 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.56□□□□□ -0.4
SgcaP82350 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SgcaP82350 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.55□□□□□ -0.4
SgcaP82350 Gm13436-201ENSMUST00000120418 567 ntBASIC12.55□□□□□ -0.4
SgcaP82350 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Gm27389-201ENSMUST00000183622 195 ntBASIC12.55□□□□□ -0.4
SgcaP82350 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.55□□□□□ -0.4
SgcaP82350 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SgcaP82350 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SgcaP82350 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.55□□□□□ -0.4
SgcaP82350 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
SgcaP82350 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SgcaP82350 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SgcaP82350 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SgcaP82350 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SgcaP82350 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.54□□□□□ -0.4
SgcaP82350 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SgcaP82350 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.54□□□□□ -0.4
SgcaP82350 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SgcaP82350 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.54□□□□□ -0.4
SgcaP82350 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Gm37055-201ENSMUST00000191866 133 ntBASIC12.54□□□□□ -0.4
SgcaP82350 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.54□□□□□ -0.4
SgcaP82350 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.54□□□□□ -0.4
SgcaP82350 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.54□□□□□ -0.4
SgcaP82350 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.54□□□□□ -0.4
SgcaP82350 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SgcaP82350 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.54□□□□□ -0.4
SgcaP82350 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SgcaP82350 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SgcaP82350 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SgcaP82350 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SgcaP82350 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SgcaP82350 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms