Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Gm14140-201ENSMUST00000119999 995 ntBASIC12.45□□□□□ -0.42
Pdlim4P70271 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Gm5364-201ENSMUST00000216789 889 ntBASIC12.45□□□□□ -0.42
Pdlim4P70271 Psmb5-202ENSMUST00000227257 622 ntBASIC12.45□□□□□ -0.42
Pdlim4P70271 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.45□□□□□ -0.42
Pdlim4P70271 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.45□□□□□ -0.42
Pdlim4P70271 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdlim4P70271 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim4P70271 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.44□□□□□ -0.42
Pdlim4P70271 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.44□□□□□ -0.42
Pdlim4P70271 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim4P70271 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim4P70271 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Gm43514-201ENSMUST00000198852 424 ntBASIC12.43□□□□□ -0.42
Pdlim4P70271 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pdlim4P70271 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim4P70271 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.43□□□□□ -0.42
Pdlim4P70271 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim4P70271 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim4P70271 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.42□□□□□ -0.42
Pdlim4P70271 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim4P70271 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim4P70271 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms