Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Crnkl1P63154 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Crnkl1P63154 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.84□□□□□ -0.03
Crnkl1P63154 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.84□□□□□ -0.03
Crnkl1P63154 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Crnkl1P63154 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Crnkl1P63154 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.84□□□□□ -0.03
Crnkl1P63154 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Crnkl1P63154 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Crnkl1P63154 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Crnkl1P63154 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Crnkl1P63154 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Crnkl1P63154 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.83□□□□□ -0.04
Crnkl1P63154 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.83□□□□□ -0.04
Crnkl1P63154 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Crnkl1P63154 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Crnkl1P63154 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Crnkl1P63154 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Crnkl1P63154 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Crnkl1P63154 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.82□□□□□ -0.04
Crnkl1P63154 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.82□□□□□ -0.04
Crnkl1P63154 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.82□□□□□ -0.04
Crnkl1P63154 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Crnkl1P63154 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Crnkl1P63154 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Crnkl1P63154 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Crnkl1P63154 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.81□□□□□ -0.04
Crnkl1P63154 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Crnkl1P63154 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Crnkl1P63154 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Crnkl1P63154 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Crnkl1P63154 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms