Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup43P59235 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup43P59235 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup43P59235 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup43P59235 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup43P59235 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup43P59235 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup43P59235 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup43P59235 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup43P59235 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup43P59235 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.11□□□□□ -0.15
Nup43P59235 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nup43P59235 Gm44492-201ENSMUST00000197012 141 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Gm45747-201ENSMUST00000212203 999 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Gm10154-201ENSMUST00000084445 354 ntBASIC14.11□□□□□ -0.15
Nup43P59235 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup43P59235 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Nup43P59235 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup43P59235 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup43P59235 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nup43P59235 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup43P59235 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Gm16198-201ENSMUST00000118766 670 ntBASIC14.1□□□□□ -0.15
Nup43P59235 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.1□□□□□ -0.15
Nup43P59235 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup43P59235 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup43P59235 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.1□□□□□ -0.15
Nup43P59235 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms