Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tpm1P58771 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.69■□□□□ 0.26
Tpm1P58771 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.69■□□□□ 0.26
Tpm1P58771 Gm6345-202ENSMUST00000180900 204 ntBASIC16.69■□□□□ 0.26
Tpm1P58771 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.69■□□□□ 0.26
Tpm1P58771 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.69■□□□□ 0.26
Tpm1P58771 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.69■□□□□ 0.26
Tpm1P58771 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tpm1P58771 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tpm1P58771 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tpm1P58771 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tpm1P58771 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Tpm1P58771 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Gm25016-201ENSMUST00000158399 131 ntBASIC16.68■□□□□ 0.26
Tpm1P58771 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.68■□□□□ 0.26
Tpm1P58771 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Tpm1P58771 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tpm1P58771 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tpm1P58771 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Gm8344-201ENSMUST00000119813 856 ntBASIC16.67■□□□□ 0.26
Tpm1P58771 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tpm1P58771 Gm44454-201ENSMUST00000198541 138 ntBASIC16.67■□□□□ 0.26
Tpm1P58771 Gm17808-201ENSMUST00000200859 894 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms