Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp20P57748 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.02■□□□□ 0.31
Mmp20P57748 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Mmp20P57748 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.02■□□□□ 0.31
Mmp20P57748 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp20P57748 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.01■□□□□ 0.31
Mmp20P57748 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp20P57748 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Mmp20P57748 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.01■□□□□ 0.31
Mmp20P57748 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mmp20P57748 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp20P57748 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.01■□□□□ 0.31
Mmp20P57748 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp20P57748 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mmp20P57748 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mmp20P57748 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp20P57748 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17■□□□□ 0.31
Mmp20P57748 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Mmp20P57748 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17■□□□□ 0.31
Mmp20P57748 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17■□□□□ 0.31
Mmp20P57748 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Gm3436-201ENSMUST00000179930 840 ntBASIC17■□□□□ 0.31
Mmp20P57748 Gm37166-201ENSMUST00000195473 2474 ntBASIC17■□□□□ 0.31
Mmp20P57748 Gm45195-201ENSMUST00000205597 1008 ntBASIC17■□□□□ 0.31
Mmp20P57748 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17■□□□□ 0.31
Mmp20P57748 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Gm20628-201ENSMUST00000177363 3215 ntBASIC17■□□□□ 0.31
Mmp20P57748 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp20P57748 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Mmp20P57748 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mmp20P57748 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.99■□□□□ 0.31
Mmp20P57748 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Mmp20P57748 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 Gm18187-201ENSMUST00000196476 984 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 Gm2451-201ENSMUST00000199447 999 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 Gm10290-201ENSMUST00000200451 999 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.99■□□□□ 0.31
Mmp20P57748 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.99■□□□□ 0.31
Mmp20P57748 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp20P57748 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms