Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh11P55288 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.64□□□□□ -0.23
Cdh11P55288 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdh11P55288 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdh11P55288 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh11P55288 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdh11P55288 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdh11P55288 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdh11P55288 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdh11P55288 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.63□□□□□ -0.23
Cdh11P55288 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.63□□□□□ -0.23
Cdh11P55288 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.63□□□□□ -0.23
Cdh11P55288 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdh11P55288 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.63□□□□□ -0.23
Cdh11P55288 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdh11P55288 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdh11P55288 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdh11P55288 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdh11P55288 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cdh11P55288 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.62□□□□□ -0.23
Cdh11P55288 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdh11P55288 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdh11P55288 Gm7230-201ENSMUST00000173026 815 ntBASIC13.62□□□□□ -0.23
Cdh11P55288 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cdh11P55288 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.62□□□□□ -0.23
Cdh11P55288 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.62□□□□□ -0.23
Cdh11P55288 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Gm8655-201ENSMUST00000221159 852 ntBASIC13.62□□□□□ -0.23
Cdh11P55288 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdh11P55288 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdh11P55288 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh11P55288 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Cdh11P55288 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cdh11P55288 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdh11P55288 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdh11P55288 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdh11P55288 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdh11P55288 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh11P55288 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms