Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abcd3P55096 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Abcd3P55096 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Abcd3P55096 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Abcd3P55096 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.37□□□□□ -0.27
Abcd3P55096 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.37□□□□□ -0.27
Abcd3P55096 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.37□□□□□ -0.27
Abcd3P55096 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.37□□□□□ -0.27
Abcd3P55096 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.37□□□□□ -0.27
Abcd3P55096 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Abcd3P55096 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.37□□□□□ -0.27
Abcd3P55096 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.36□□□□□ -0.27
Abcd3P55096 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Abcd3P55096 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.36□□□□□ -0.27
Abcd3P55096 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.36□□□□□ -0.27
Abcd3P55096 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Abcd3P55096 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.36□□□□□ -0.27
Abcd3P55096 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.36□□□□□ -0.27
Abcd3P55096 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Gm15590-201ENSMUST00000078419 552 ntBASIC13.36□□□□□ -0.27
Abcd3P55096 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Abcd3P55096 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.36□□□□□ -0.27
Abcd3P55096 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Abcd3P55096 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abcd3P55096 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.35□□□□□ -0.27
Abcd3P55096 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Abcd3P55096 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Abcd3P55096 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Abcd3P55096 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.35□□□□□ -0.27
Abcd3P55096 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.35□□□□□ -0.27
Abcd3P55096 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Abcd3P55096 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.35□□□□□ -0.27
Abcd3P55096 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.35□□□□□ -0.27
Abcd3P55096 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.35□□□□□ -0.27
Abcd3P55096 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abcd3P55096 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms