Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Fdft1P53798 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Fdft1P53798 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.95□□□□□ -0.02
Fdft1P53798 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Fdft1P53798 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.95□□□□□ -0.02
Fdft1P53798 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.95□□□□□ -0.02
Fdft1P53798 Gm7222-201ENSMUST00000117512 906 ntBASIC14.95□□□□□ -0.02
Fdft1P53798 Gm7862-201ENSMUST00000121461 292 ntBASIC14.95□□□□□ -0.02
Fdft1P53798 Mir8098-201ENSMUST00000184011 137 ntBASIC14.95□□□□□ -0.02
Fdft1P53798 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fdft1P53798 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.95□□□□□ -0.02
Fdft1P53798 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fdft1P53798 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Fdft1P53798 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fdft1P53798 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fdft1P53798 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fdft1P53798 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Fdft1P53798 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.94□□□□□ -0.02
Fdft1P53798 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Fdft1P53798 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Fdft1P53798 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Gm7230-201ENSMUST00000173026 815 ntBASIC14.94□□□□□ -0.02
Fdft1P53798 Gm5682-201ENSMUST00000173402 505 ntBASIC14.94□□□□□ -0.02
Fdft1P53798 Gm10499-201ENSMUST00000174094 934 ntBASIC14.94□□□□□ -0.02
Fdft1P53798 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.94□□□□□ -0.02
Fdft1P53798 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Fdft1P53798 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Fdft1P53798 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.94□□□□□ -0.02
Fdft1P53798 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Fdft1P53798 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.94□□□□□ -0.02
Fdft1P53798 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Fdft1P53798 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.93□□□□□ -0.02
Fdft1P53798 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.93□□□□□ -0.02
Fdft1P53798 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Fdft1P53798 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.93□□□□□ -0.02
Fdft1P53798 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.93□□□□□ -0.02
Fdft1P53798 Gm37153-201ENSMUST00000193637 231 ntBASIC14.93□□□□□ -0.02
Fdft1P53798 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.93□□□□□ -0.02
Fdft1P53798 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.93□□□□□ -0.02
Fdft1P53798 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Fdft1P53798 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Fdft1P53798 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Fdft1P53798 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fdft1P53798 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.92□□□□□ -0.02
Fdft1P53798 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fdft1P53798 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Fdft1P53798 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms