Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.32□□□□□ -0.12
Sox3P53784 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Gm27622-201ENSMUST00000183779 60 ntBASIC14.32□□□□□ -0.12
Sox3P53784 Gm36967-201ENSMUST00000193814 266 ntBASIC14.32□□□□□ -0.12
Sox3P53784 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 Gm45747-201ENSMUST00000212203 999 ntBASIC14.32□□□□□ -0.12
Sox3P53784 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox3P53784 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.32□□□□□ -0.12
Sox3P53784 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox3P53784 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox3P53784 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Sox3P53784 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sox3P53784 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sox3P53784 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox3P53784 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox3P53784 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.31□□□□□ -0.12
Sox3P53784 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.31□□□□□ -0.12
Sox3P53784 Gm11745-201ENSMUST00000121669 448 ntBASIC14.31□□□□□ -0.12
Sox3P53784 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.31□□□□□ -0.12
Sox3P53784 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.31□□□□□ -0.12
Sox3P53784 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.31□□□□□ -0.12
Sox3P53784 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.31□□□□□ -0.12
Sox3P53784 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.31□□□□□ -0.12
Sox3P53784 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.31□□□□□ -0.12
Sox3P53784 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox3P53784 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox3P53784 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Sox3P53784 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox3P53784 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox3P53784 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.3□□□□□ -0.12
Sox3P53784 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Sox3P53784 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox3P53784 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox3P53784 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms