Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Gm14822-201ENSMUST00000122247 291 ntBASIC17.74■□□□□ 0.43
Ercc3P49135 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Ercc3P49135 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.74■□□□□ 0.43
Ercc3P49135 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ercc3P49135 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ercc3P49135 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc3P49135 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ercc3P49135 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Ercc3P49135 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ercc3P49135 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.73■□□□□ 0.43
Ercc3P49135 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.73■□□□□ 0.43
Ercc3P49135 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.73■□□□□ 0.43
Ercc3P49135 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ercc3P49135 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.73■□□□□ 0.43
Ercc3P49135 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.73■□□□□ 0.43
Ercc3P49135 Thap2-203ENSMUST00000218989 527 ntBASIC17.73■□□□□ 0.43
Ercc3P49135 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.73■□□□□ 0.43
Ercc3P49135 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.73■□□□□ 0.43
Ercc3P49135 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc3P49135 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ercc3P49135 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.72■□□□□ 0.43
Ercc3P49135 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.72■□□□□ 0.43
Ercc3P49135 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ercc3P49135 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.72■□□□□ 0.43
Ercc3P49135 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ercc3P49135 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.72■□□□□ 0.43
Ercc3P49135 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc3P49135 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ercc3P49135 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ercc3P49135 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.71■□□□□ 0.43
Ercc3P49135 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ercc3P49135 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.71■□□□□ 0.43
Ercc3P49135 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.71■□□□□ 0.43
Ercc3P49135 Gm27301-201ENSMUST00000184012 127 ntBASIC17.71■□□□□ 0.43
Ercc3P49135 Mir8117-201ENSMUST00000184773 107 ntBASIC17.71■□□□□ 0.43
Ercc3P49135 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.71■□□□□ 0.43
Ercc3P49135 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ercc3P49135 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc3P49135 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ercc3P49135 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ercc3P49135 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ercc3P49135 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ercc3P49135 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Ercc3P49135 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms