Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-6P43688 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-6P43688 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nkx2-6P43688 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Gm2810-201ENSMUST00000118681 990 ntBASIC14.14□□□□□ -0.15
Nkx2-6P43688 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Gm7774-201ENSMUST00000200064 533 ntBASIC14.14□□□□□ -0.15
Nkx2-6P43688 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-6P43688 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.13□□□□□ -0.15
Nkx2-6P43688 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.13□□□□□ -0.15
Nkx2-6P43688 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.13□□□□□ -0.15
Nkx2-6P43688 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.13□□□□□ -0.15
Nkx2-6P43688 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-6P43688 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Gm11543-201ENSMUST00000120758 370 ntBASIC14.12□□□□□ -0.15
Nkx2-6P43688 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.12□□□□□ -0.15
Nkx2-6P43688 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-6P43688 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms