Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.33□□□□□ -0.12
Sox18P43680 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox18P43680 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sox18P43680 Mir6420-201ENSMUST00000185032 102 ntBASIC14.33□□□□□ -0.12
Sox18P43680 Gm6218-201ENSMUST00000219812 628 ntBASIC14.33□□□□□ -0.12
Sox18P43680 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.33□□□□□ -0.12
Sox18P43680 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Sox18P43680 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Sox18P43680 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.33□□□□□ -0.12
Sox18P43680 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox18P43680 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox18P43680 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox18P43680 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.32□□□□□ -0.12
Sox18P43680 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.32□□□□□ -0.12
Sox18P43680 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Gm13829-201ENSMUST00000119600 138 ntBASIC14.32□□□□□ -0.12
Sox18P43680 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.32□□□□□ -0.12
Sox18P43680 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox18P43680 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox18P43680 Gm8318-201ENSMUST00000182954 872 ntBASIC14.32□□□□□ -0.12
Sox18P43680 Gm8602-201ENSMUST00000184045 607 ntBASIC14.32□□□□□ -0.12
Sox18P43680 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox18P43680 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox18P43680 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Sox18P43680 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox18P43680 Gm12138-201ENSMUST00000122180 951 ntBASIC14.31□□□□□ -0.12
Sox18P43680 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.31□□□□□ -0.12
Sox18P43680 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Gm27533-201ENSMUST00000183800 152 ntBASIC14.31□□□□□ -0.12
Sox18P43680 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox18P43680 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC14.31□□□□□ -0.12
Sox18P43680 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.31□□□□□ -0.12
Sox18P43680 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.31□□□□□ -0.12
Sox18P43680 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox18P43680 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Sox18P43680 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox18P43680 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.3□□□□□ -0.12
Sox18P43680 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Gm18766-201ENSMUST00000189811 808 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Gm43630-201ENSMUST00000201550 776 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Gm43377-201ENSMUST00000201640 455 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox18P43680 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Sox18P43680 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.3□□□□□ -0.12
Sox18P43680 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Sox18P43680 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms