Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.45□□□□□ -0.1
Tnfsf4P43488 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.45□□□□□ -0.1
Tnfsf4P43488 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf4P43488 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.44□□□□□ -0.1
Tnfsf4P43488 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm4535-201ENSMUST00000182274 558 ntBASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm43767-201ENSMUST00000198933 381 ntBASIC14.44□□□□□ -0.1
Tnfsf4P43488 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm10355-201ENSMUST00000097146 517 ntBASIC14.44□□□□□ -0.1
Tnfsf4P43488 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Tnfsf4P43488 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf4P43488 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.43□□□□□ -0.1
Tnfsf4P43488 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tnfsf4P43488 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf4P43488 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.42□□□□□ -0.1
Tnfsf4P43488 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Gm18669-201ENSMUST00000216049 778 ntBASIC14.42□□□□□ -0.1
Tnfsf4P43488 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.42□□□□□ -0.1
Tnfsf4P43488 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tnfsf4P43488 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms