Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc2P43407 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sdc2P43407 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sdc2P43407 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sdc2P43407 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.78■□□□□ 0.28
Sdc2P43407 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.78■□□□□ 0.28
Sdc2P43407 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.78■□□□□ 0.28
Sdc2P43407 Gm34391-201ENSMUST00000203706 907 ntBASIC16.78■□□□□ 0.28
Sdc2P43407 Birc2-201ENSMUST00000054878 378 ntBASIC16.78■□□□□ 0.28
Sdc2P43407 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sdc2P43407 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sdc2P43407 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.78■□□□□ 0.28
Sdc2P43407 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc2P43407 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sdc2P43407 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sdc2P43407 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.77■□□□□ 0.28
Sdc2P43407 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Sdc2P43407 Gm25990-201ENSMUST00000102440 86 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Gm9103-201ENSMUST00000119371 405 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Gm12134-201ENSMUST00000122109 520 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Sdc2P43407 Gm5682-201ENSMUST00000173402 505 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.77■□□□□ 0.28
Sdc2P43407 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc2P43407 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.77■□□□□ 0.28
Sdc2P43407 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sdc2P43407 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc2P43407 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc2P43407 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc2P43407 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.77■□□□□ 0.27
Sdc2P43407 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Sdc2P43407 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc2P43407 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sdc2P43407 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc2P43407 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc2P43407 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Sdc2P43407 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.76■□□□□ 0.27
Sdc2P43407 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.76■□□□□ 0.27
Sdc2P43407 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.76■□□□□ 0.27
Sdc2P43407 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.76■□□□□ 0.27
Sdc2P43407 Gm27459-201ENSMUST00000184860 107 ntBASIC16.76■□□□□ 0.27
Sdc2P43407 Gm37153-201ENSMUST00000193637 231 ntBASIC16.76■□□□□ 0.27
Sdc2P43407 Gm43767-201ENSMUST00000198933 381 ntBASIC16.76■□□□□ 0.27
Sdc2P43407 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.76■□□□□ 0.27
Sdc2P43407 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.76■□□□□ 0.27
Sdc2P43407 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.76■□□□□ 0.27
Sdc2P43407 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Sdc2P43407 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sdc2P43407 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc2P43407 Carlr-201ENSMUST00000181515 2574 ntBASIC16.76■□□□□ 0.27
Sdc2P43407 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sdc2P43407 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms