Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx2P43241 App-207ENSMUST00000227737 2827 ntBASIC14.14□□□□□ -0.15
Cdx2P43241 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdx2P43241 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Cdx2P43241 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdx2P43241 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cdx2P43241 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdx2P43241 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdx2P43241 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdx2P43241 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdx2P43241 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx2P43241 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdx2P43241 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.12□□□□□ -0.15
Cdx2P43241 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.12□□□□□ -0.15
Cdx2P43241 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.12□□□□□ -0.15
Cdx2P43241 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdx2P43241 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Gm4875-201ENSMUST00000118257 786 ntBASIC14.12□□□□□ -0.15
Cdx2P43241 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdx2P43241 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdx2P43241 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdx2P43241 Gm18187-201ENSMUST00000196476 984 ntBASIC14.12□□□□□ -0.15
Cdx2P43241 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdx2P43241 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdx2P43241 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdx2P43241 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Cdx2P43241 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx2P43241 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdx2P43241 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdx2P43241 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdx2P43241 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
Cdx2P43241 Gm28631-201ENSMUST00000190740 334 ntBASIC14.11□□□□□ -0.15
Cdx2P43241 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdx2P43241 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.11□□□□□ -0.15
Cdx2P43241 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdx2P43241 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.11□□□□□ -0.15
Cdx2P43241 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx2P43241 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms