Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Gm13836-201ENSMUST00000121159 501 ntBASIC12.53□□□□□ -0.4
Hmx3P42581 Gm23634-201ENSMUST00000175071 91 ntBASIC12.53□□□□□ -0.4
Hmx3P42581 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hmx3P42581 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.53□□□□□ -0.4
Hmx3P42581 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmx3P42581 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmx3P42581 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmx3P42581 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmx3P42581 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmx3P42581 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Hmx3P42581 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmx3P42581 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmx3P42581 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmx3P42581 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Gm17808-201ENSMUST00000200859 894 ntBASIC12.52□□□□□ -0.41
Hmx3P42581 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hmx3P42581 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hmx3P42581 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Hmx3P42581 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hmx3P42581 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmx3P42581 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hmx3P42581 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Hmx3P42581 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Gm11950-201ENSMUST00000121615 838 ntBASIC12.51□□□□□ -0.41
Hmx3P42581 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.51□□□□□ -0.41
Hmx3P42581 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.51□□□□□ -0.41
Hmx3P42581 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hmx3P42581 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.51□□□□□ -0.41
Hmx3P42581 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmx3P42581 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms