Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.28□□□□□ -0.44
VhlP40338 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Gm23634-201ENSMUST00000175071 91 ntBASIC12.28□□□□□ -0.44
VhlP40338 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
VhlP40338 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.28□□□□□ -0.44
VhlP40338 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.28□□□□□ -0.44
VhlP40338 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VhlP40338 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VhlP40338 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VhlP40338 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
VhlP40338 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
VhlP40338 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Gm15358-201ENSMUST00000119249 520 ntBASIC12.27□□□□□ -0.45
VhlP40338 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.27□□□□□ -0.45
VhlP40338 Gm6659-201ENSMUST00000174752 547 ntBASIC12.27□□□□□ -0.45
VhlP40338 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.27□□□□□ -0.45
VhlP40338 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.27□□□□□ -0.45
VhlP40338 Gm29518-201ENSMUST00000190858 372 ntBASIC12.27□□□□□ -0.45
VhlP40338 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.27□□□□□ -0.45
VhlP40338 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.27□□□□□ -0.45
VhlP40338 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.27□□□□□ -0.45
VhlP40338 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.27□□□□□ -0.45
VhlP40338 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VhlP40338 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.27□□□□□ -0.45
VhlP40338 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.27□□□□□ -0.45
VhlP40338 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.27□□□□□ -0.45
VhlP40338 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.27□□□□□ -0.45
VhlP40338 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VhlP40338 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
VhlP40338 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Gm15165-201ENSMUST00000118140 502 ntBASIC12.26□□□□□ -0.45
VhlP40338 Gm4459-201ENSMUST00000118750 468 ntBASIC12.26□□□□□ -0.45
VhlP40338 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 AA414768-201ENSMUST00000121924 1257 ntBASIC12.26□□□□□ -0.45
VhlP40338 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.26□□□□□ -0.45
VhlP40338 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Gm25745-201ENSMUST00000174945 133 ntBASIC12.26□□□□□ -0.45
VhlP40338 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.26□□□□□ -0.45
VhlP40338 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.26□□□□□ -0.45
VhlP40338 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.26□□□□□ -0.45
VhlP40338 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VhlP40338 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.26□□□□□ -0.45
VhlP40338 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VhlP40338 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms