Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cdh4P39038 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdh4P39038 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.31□□□□□ -0.12
Cdh4P39038 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdh4P39038 Gm5177-201ENSMUST00000183092 997 ntBASIC14.31□□□□□ -0.12
Cdh4P39038 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh4P39038 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.31□□□□□ -0.12
Cdh4P39038 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Gm17271-201ENSMUST00000165535 355 ntBASIC14.3□□□□□ -0.12
Cdh4P39038 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
Cdh4P39038 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdh4P39038 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Thap2-203ENSMUST00000218989 527 ntBASIC14.3□□□□□ -0.12
Cdh4P39038 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.3□□□□□ -0.12
Cdh4P39038 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdh4P39038 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdh4P39038 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh4P39038 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cdh4P39038 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cdh4P39038 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cdh4P39038 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdh4P39038 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdh4P39038 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdh4P39038 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdh4P39038 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdh4P39038 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Gm11594-201ENSMUST00000122313 162 ntBASIC14.29□□□□□ -0.12
Cdh4P39038 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Gm2272-201ENSMUST00000194903 582 ntBASIC14.29□□□□□ -0.12
Cdh4P39038 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh4P39038 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms