Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
RetP35546 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.01□□□□□ -0.17
RetP35546 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RetP35546 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.01□□□□□ -0.17
RetP35546 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.01□□□□□ -0.17
RetP35546 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.01□□□□□ -0.17
RetP35546 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RetP35546 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14□□□□□ -0.17
RetP35546 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RetP35546 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14□□□□□ -0.17
RetP35546 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RetP35546 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Mir1895-201ENSMUST00000122615 79 ntBASIC14□□□□□ -0.17
RetP35546 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14□□□□□ -0.17
RetP35546 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14□□□□□ -0.17
RetP35546 Gm30437-201ENSMUST00000206086 1201 ntBASIC14□□□□□ -0.17
RetP35546 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14□□□□□ -0.17
RetP35546 AC154572.2-201ENSMUST00000225105 997 ntBASIC14□□□□□ -0.17
RetP35546 AC159295.1-201ENSMUST00000225326 940 ntBASIC14□□□□□ -0.17
RetP35546 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14□□□□□ -0.17
RetP35546 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RetP35546 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Gm11960-202ENSMUST00000181063 2858 ntBASIC14□□□□□ -0.17
RetP35546 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RetP35546 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
RetP35546 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RetP35546 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RetP35546 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RetP35546 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RetP35546 Gm4899-201ENSMUST00000178708 719 ntBASIC13.99□□□□□ -0.17
RetP35546 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.99□□□□□ -0.17
RetP35546 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RetP35546 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RetP35546 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.98□□□□□ -0.17
RetP35546 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RetP35546 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RetP35546 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.98□□□□□ -0.17
RetP35546 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RetP35546 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RetP35546 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RetP35546 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms