Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.77□□□□□ -0.21
Sftpa1P35242 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.77□□□□□ -0.21
Sftpa1P35242 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.77□□□□□ -0.21
Sftpa1P35242 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sftpa1P35242 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sftpa1P35242 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.77□□□□□ -0.21
Sftpa1P35242 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sftpa1P35242 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.76□□□□□ -0.21
Sftpa1P35242 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Mir1897-201ENSMUST00000122581 272 ntBASIC13.76□□□□□ -0.21
Sftpa1P35242 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.76□□□□□ -0.21
Sftpa1P35242 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.76□□□□□ -0.21
Sftpa1P35242 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.76□□□□□ -0.21
Sftpa1P35242 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.76□□□□□ -0.21
Sftpa1P35242 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.76□□□□□ -0.21
Sftpa1P35242 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.76□□□□□ -0.21
Sftpa1P35242 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sftpa1P35242 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.75□□□□□ -0.21
Sftpa1P35242 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Gm5566-201ENSMUST00000116118 459 ntBASIC13.75□□□□□ -0.21
Sftpa1P35242 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.75□□□□□ -0.21
Sftpa1P35242 Gm45384-201ENSMUST00000210451 277 ntBASIC13.75□□□□□ -0.21
Sftpa1P35242 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.75□□□□□ -0.21
Sftpa1P35242 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sftpa1P35242 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sftpa1P35242 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.74□□□□□ -0.21
Sftpa1P35242 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sftpa1P35242 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Asic1-205ENSMUST00000228185 1818 ntBASIC13.74□□□□□ -0.21
Sftpa1P35242 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.74□□□□□ -0.21
Sftpa1P35242 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sftpa1P35242 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Gm4875-201ENSMUST00000118257 786 ntBASIC13.74□□□□□ -0.21
Sftpa1P35242 Gm14042-201ENSMUST00000120139 833 ntBASIC13.74□□□□□ -0.21
Sftpa1P35242 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.74□□□□□ -0.21
Sftpa1P35242 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.74□□□□□ -0.21
Sftpa1P35242 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sftpa1P35242 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms