Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rom1P32958 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.84□□□□□ -0.51
Rom1P32958 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rom1P32958 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rom1P32958 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rom1P32958 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rom1P32958 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rom1P32958 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Rom1P32958 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Gm13312-201ENSMUST00000119631 718 ntBASIC11.83□□□□□ -0.52
Rom1P32958 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rom1P32958 Gm10812-201ENSMUST00000099864 546 ntBASIC11.83□□□□□ -0.52
Rom1P32958 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rom1P32958 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rom1P32958 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rom1P32958 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.82□□□□□ -0.52
Rom1P32958 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.82□□□□□ -0.52
Rom1P32958 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.82□□□□□ -0.52
Rom1P32958 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rom1P32958 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rom1P32958 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.82□□□□□ -0.52
Rom1P32958 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.82□□□□□ -0.52
Rom1P32958 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rom1P32958 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.81□□□□□ -0.52
Rom1P32958 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.81□□□□□ -0.52
Rom1P32958 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms