Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Gm25990-201ENSMUST00000102440 86 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Gm24589-201ENSMUST00000116692 94 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Gm7222-201ENSMUST00000117512 906 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Gm18489-201ENSMUST00000172565 551 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Gm37153-201ENSMUST00000193637 231 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Gm34391-201ENSMUST00000203706 907 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Rps4l-201ENSMUST00000071745 943 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Celf4-206ENSMUST00000224553 1729 ntBASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf1aP25118 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Tnfrsf1aP25118 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf1aP25118 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1aP25118 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1aP25118 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1aP25118 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf1aP25118 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf1aP25118 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfrsf1aP25118 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms