Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pde6bP23440 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pde6bP23440 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 App-207ENSMUST00000227737 2827 ntBASIC16.32■□□□□ 0.2
Pde6bP23440 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pde6bP23440 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pde6bP23440 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.32■□□□□ 0.2
Pde6bP23440 Gm22175-201ENSMUST00000175007 78 ntBASIC16.32■□□□□ 0.2
Pde6bP23440 Gm24158-201ENSMUST00000175263 71 ntBASIC16.32■□□□□ 0.2
Pde6bP23440 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.32■□□□□ 0.2
Pde6bP23440 Gm20949-201ENSMUST00000206478 952 ntBASIC16.32■□□□□ 0.2
Pde6bP23440 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.32■□□□□ 0.2
Pde6bP23440 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Pde6bP23440 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pde6bP23440 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6bP23440 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.31■□□□□ 0.2
Pde6bP23440 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.31■□□□□ 0.2
Pde6bP23440 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pde6bP23440 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pde6bP23440 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.31■□□□□ 0.2
Pde6bP23440 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pde6bP23440 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.31■□□□□ 0.2
Pde6bP23440 Gm10253-201ENSMUST00000194270 940 ntBASIC16.31■□□□□ 0.2
Pde6bP23440 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.31■□□□□ 0.2
Pde6bP23440 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.31■□□□□ 0.2
Pde6bP23440 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pde6bP23440 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Pde6bP23440 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pde6bP23440 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pde6bP23440 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pde6bP23440 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Gm22065-201ENSMUST00000103753 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm22066-201ENSMUST00000103761 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24932-201ENSMUST00000103763 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24115-201ENSMUST00000103799 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm22190-201ENSMUST00000103827 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm22191-201ENSMUST00000103831 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24721-201ENSMUST00000103849 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm28018-201ENSMUST00000103869 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm26399-201ENSMUST00000103937 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Gm25349-201ENSMUST00000177728 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm23616-201ENSMUST00000177797 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm25871-201ENSMUST00000177816 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24752-201ENSMUST00000178240 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24496-201ENSMUST00000178287 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm25649-201ENSMUST00000178476 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm25548-201ENSMUST00000178681 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm23147-201ENSMUST00000178841 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm26095-201ENSMUST00000179270 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm22171-201ENSMUST00000179283 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm23936-201ENSMUST00000179354 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm22619-201ENSMUST00000179516 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm25255-201ENSMUST00000179579 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24755-201ENSMUST00000179691 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm26506-201ENSMUST00000179692 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm25086-201ENSMUST00000179931 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm23243-201ENSMUST00000180047 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24659-201ENSMUST00000180212 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm24169-201ENSMUST00000180244 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm23689-201ENSMUST00000180354 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm27359-201ENSMUST00000184153 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm27785-201ENSMUST00000184268 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Gm27466-201ENSMUST00000184396 110 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms