Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.35□□□□□ -0.11
BdnfP21237 Gm8097-201ENSMUST00000117903 829 ntBASIC14.35□□□□□ -0.11
BdnfP21237 Gm8344-201ENSMUST00000119813 856 ntBASIC14.35□□□□□ -0.11
BdnfP21237 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.35□□□□□ -0.11
BdnfP21237 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.35□□□□□ -0.11
BdnfP21237 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.35□□□□□ -0.11
BdnfP21237 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
BdnfP21237 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
BdnfP21237 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
BdnfP21237 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
BdnfP21237 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
BdnfP21237 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.34□□□□□ -0.11
BdnfP21237 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Ank2-226ENSMUST00000189368 339 ntBASIC14.34□□□□□ -0.11
BdnfP21237 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BdnfP21237 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
BdnfP21237 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
BdnfP21237 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BdnfP21237 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BdnfP21237 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BdnfP21237 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BdnfP21237 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BdnfP21237 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
BdnfP21237 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BdnfP21237 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
BdnfP21237 Celf4-206ENSMUST00000224553 1729 ntBASIC14.33□□□□□ -0.12
BdnfP21237 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
BdnfP21237 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
BdnfP21237 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.33□□□□□ -0.12
BdnfP21237 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.33□□□□□ -0.12
BdnfP21237 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.33□□□□□ -0.12
BdnfP21237 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.33□□□□□ -0.12
BdnfP21237 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.33□□□□□ -0.12
BdnfP21237 Gm18669-201ENSMUST00000216049 778 ntBASIC14.33□□□□□ -0.12
BdnfP21237 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
BdnfP21237 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.33□□□□□ -0.12
BdnfP21237 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
BdnfP21237 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms