Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TP20293 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TP20293 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TP20293 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.1□□□□□ -0.15
TP20293 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.1□□□□□ -0.15
TP20293 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.1□□□□□ -0.15
TP20293 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.1□□□□□ -0.15
TP20293 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
TP20293 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.1□□□□□ -0.15
TP20293 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.1□□□□□ -0.15
TP20293 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TP20293 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TP20293 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TP20293 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.09□□□□□ -0.15
TP20293 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.09□□□□□ -0.15
TP20293 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.09□□□□□ -0.15
TP20293 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Gm15590-201ENSMUST00000078419 552 ntBASIC14.09□□□□□ -0.15
TP20293 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.09□□□□□ -0.15
TP20293 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TP20293 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TP20293 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TP20293 BC037039-201ENSMUST00000192003 2205 ntBASIC14.09□□□□□ -0.15
TP20293 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TP20293 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TP20293 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TP20293 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TP20293 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TP20293 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TP20293 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TP20293 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TP20293 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TP20293 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.08□□□□□ -0.16
TP20293 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.08□□□□□ -0.16
TP20293 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.08□□□□□ -0.16
TP20293 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Gm7787-201ENSMUST00000216858 688 ntBASIC14.08□□□□□ -0.16
TP20293 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.08□□□□□ -0.16
TP20293 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.08□□□□□ -0.16
TP20293 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TP20293 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.08□□□□□ -0.16
TP20293 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.08□□□□□ -0.16
TP20293 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Grk6-207ENSMUST00000225925 2769 ntBASIC14.08□□□□□ -0.16
TP20293 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TP20293 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TP20293 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TP20293 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TP20293 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TP20293 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TP20293 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms