Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cd44P15379 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cd44P15379 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.71■□□□□ 0.11
Cd44P15379 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cd44P15379 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.71■□□□□ 0.11
Cd44P15379 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Gm14859-201ENSMUST00000117752 357 ntBASIC15.71■□□□□ 0.11
Cd44P15379 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.71■□□□□ 0.11
Cd44P15379 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.71■□□□□ 0.11
Cd44P15379 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.71■□□□□ 0.11
Cd44P15379 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cd44P15379 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cd44P15379 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cd44P15379 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cd44P15379 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cd44P15379 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.7■□□□□ 0.1
Cd44P15379 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.7■□□□□ 0.1
Cd44P15379 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.7■□□□□ 0.1
Cd44P15379 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.7■□□□□ 0.1
Cd44P15379 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd44P15379 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cd44P15379 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cd44P15379 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cd44P15379 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cd44P15379 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cd44P15379 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.69■□□□□ 0.1
Cd44P15379 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd44P15379 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.69■□□□□ 0.1
Cd44P15379 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cd44P15379 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.69■□□□□ 0.1
Cd44P15379 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.69■□□□□ 0.1
Cd44P15379 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd44P15379 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd44P15379 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cd44P15379 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd44P15379 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd44P15379 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd44P15379 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cd44P15379 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd44P15379 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd44P15379 Gm18669-201ENSMUST00000216049 778 ntBASIC15.68■□□□□ 0.1
Cd44P15379 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms