Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Msx1P13297 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Msx1P13297 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 Sybu-209ENSMUST00000228639 4113 ntBASIC14.19□□□□□ -0.14
Msx1P13297 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Msx1P13297 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx1P13297 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
Msx1P13297 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Msx1P13297 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.18□□□□□ -0.14
Msx1P13297 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.18□□□□□ -0.14
Msx1P13297 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.18□□□□□ -0.14
Msx1P13297 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Gm11745-201ENSMUST00000121669 448 ntBASIC14.18□□□□□ -0.14
Msx1P13297 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.18□□□□□ -0.14
Msx1P13297 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.18□□□□□ -0.14
Msx1P13297 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Gm25948-201ENSMUST00000175334 112 ntBASIC14.18□□□□□ -0.14
Msx1P13297 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.18□□□□□ -0.14
Msx1P13297 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.18□□□□□ -0.14
Msx1P13297 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.18□□□□□ -0.14
Msx1P13297 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.18□□□□□ -0.14
Msx1P13297 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
Msx1P13297 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx1P13297 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.17□□□□□ -0.14
Msx1P13297 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.17□□□□□ -0.14
Msx1P13297 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Msx1P13297 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.17□□□□□ -0.14
Msx1P13297 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Mir6990-201ENSMUST00000183724 91 ntBASIC14.17□□□□□ -0.14
Msx1P13297 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.17□□□□□ -0.14
Msx1P13297 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Msx1P13297 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Msx1P13297 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Msx1P13297 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Msx1P13297 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.17□□□□□ -0.14
Msx1P13297 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx1P13297 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Msx1P13297 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Msx1P13297 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Msx1P13297 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.16□□□□□ -0.14
Msx1P13297 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msx1P13297 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms