Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fv4P11370 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Fv4P11370 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.46□□□□□ -0.09
Fv4P11370 Gm7230-201ENSMUST00000173026 815 ntBASIC14.46□□□□□ -0.09
Fv4P11370 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Gm6376-201ENSMUST00000209407 580 ntBASIC14.46□□□□□ -0.09
Fv4P11370 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fv4P11370 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Fv4P11370 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Fv4P11370 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Fv4P11370 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Fv4P11370 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.45□□□□□ -0.1
Fv4P11370 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Fv4P11370 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Gm23547-201ENSMUST00000158210 271 ntBASIC14.45□□□□□ -0.1
Fv4P11370 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.45□□□□□ -0.1
Fv4P11370 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Fv4P11370 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Fv4P11370 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Fv4P11370 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fv4P11370 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Fv4P11370 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Fv4P11370 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.44□□□□□ -0.1
Fv4P11370 Gm12008-201ENSMUST00000117791 755 ntBASIC14.44□□□□□ -0.1
Fv4P11370 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.44□□□□□ -0.1
Fv4P11370 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.44□□□□□ -0.1
Fv4P11370 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Fv4P11370 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.44□□□□□ -0.1
Fv4P11370 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Fv4P11370 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fv4P11370 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Fv4P11370 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.43□□□□□ -0.1
Fv4P11370 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms