Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccl3P10855 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccl3P10855 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ccl3P10855 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Ccl3P10855 Asic1-205ENSMUST00000228185 1818 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccl3P10855 Gm12859-201ENSMUST00000117834 427 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ccl3P10855 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl3P10855 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccl3P10855 Gm29667-201ENSMUST00000190817 490 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Gm45098-201ENSMUST00000207179 657 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Gm46209-201ENSMUST00000217912 553 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Gm6218-201ENSMUST00000219812 628 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccl3P10855 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccl3P10855 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.14□□□□□ -0.31
Ccl3P10855 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccl3P10855 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Ccl3P10855 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccl3P10855 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccl3P10855 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ccl3P10855 Gm4875-201ENSMUST00000118257 786 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Gm12490-201ENSMUST00000120255 560 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccl3P10855 Gm29310-201ENSMUST00000185468 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21825-201ENSMUST00000185728 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm29109-201ENSMUST00000185895 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21896-201ENSMUST00000186520 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21873-201ENSMUST00000186728 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21794-201ENSMUST00000187056 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21880-201ENSMUST00000187275 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21826-201ENSMUST00000187451 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21198-201ENSMUST00000188393 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21749-201ENSMUST00000189343 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21901-201ENSMUST00000189568 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm29424-201ENSMUST00000189716 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm28599-201ENSMUST00000189838 694 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21867-201ENSMUST00000189917 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm29269-201ENSMUST00000190087 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21722-201ENSMUST00000190153 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm28423-201ENSMUST00000190701 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21899-201ENSMUST00000190745 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21910-201ENSMUST00000191163 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21849-201ENSMUST00000191571 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm28678-201ENSMUST00000191593 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm20910-201ENSMUST00000193268 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gm21871-201ENSMUST00000194621 696 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.13□□□□□ -0.31
Ccl3P10855 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccl3P10855 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.13□□□□□ -0.31
Ccl3P10855 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccl3P10855 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms