Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.89■□□□□ 0.3
Surf1P09925 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Surf1P09925 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Surf1P09925 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Surf1P09925 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Surf1P09925 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Surf1P09925 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.89■□□□□ 0.29
Surf1P09925 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Surf1P09925 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.89■□□□□ 0.29
Surf1P09925 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
Surf1P09925 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Surf1P09925 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.89■□□□□ 0.29
Surf1P09925 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.89■□□□□ 0.29
Surf1P09925 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.89■□□□□ 0.29
Surf1P09925 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Surf1P09925 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.88■□□□□ 0.29
Surf1P09925 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Surf1P09925 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.88■□□□□ 0.29
Surf1P09925 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Surf1P09925 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Surf1P09925 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Surf1P09925 Gm12260-201ENSMUST00000122447 411 ntBASIC16.88■□□□□ 0.29
Surf1P09925 Gm9727-201ENSMUST00000161387 555 ntBASIC16.88■□□□□ 0.29
Surf1P09925 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.88■□□□□ 0.29
Surf1P09925 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.88■□□□□ 0.29
Surf1P09925 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Surf1P09925 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Surf1P09925 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Surf1P09925 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.87■□□□□ 0.29
Surf1P09925 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Surf1P09925 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.87■□□□□ 0.29
Surf1P09925 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.87■□□□□ 0.29
Surf1P09925 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Gm8000-201ENSMUST00000188378 592 ntBASIC16.87■□□□□ 0.29
Surf1P09925 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.87■□□□□ 0.29
Surf1P09925 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Surf1P09925 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.86■□□□□ 0.29
Surf1P09925 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Surf1P09925 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms