Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxc9P09633 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hoxc9P09633 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Gm22189-201ENSMUST00000103822 86 ntBASIC19.26■□□□□ 0.67
Hoxc9P09633 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hoxc9P09633 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Gm12490-201ENSMUST00000120255 560 ntBASIC19.26■□□□□ 0.67
Hoxc9P09633 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Gm3436-201ENSMUST00000179930 840 ntBASIC19.26■□□□□ 0.67
Hoxc9P09633 Gm9794-201ENSMUST00000202370 423 ntBASIC19.26■□□□□ 0.67
Hoxc9P09633 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.26■□□□□ 0.67
Hoxc9P09633 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hoxc9P09633 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hoxc9P09633 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.26■□□□□ 0.67
Hoxc9P09633 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc9P09633 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.26■□□□□ 0.67
Hoxc9P09633 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Gm14928-201ENSMUST00000120198 477 ntBASIC19.25■□□□□ 0.67
Hoxc9P09633 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.25■□□□□ 0.67
Hoxc9P09633 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc9P09633 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hoxc9P09633 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Hoxc9P09633 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc9P09633 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc9P09633 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.24■□□□□ 0.67
Hoxc9P09633 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc9P09633 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hoxc9P09633 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.24■□□□□ 0.67
Hoxc9P09633 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc9P09633 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hoxc9P09633 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm9726-201ENSMUST00000180321 678 ntBASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm20445-201ENSMUST00000061905 565 ntBASIC19.23■□□□□ 0.67
Hoxc9P09633 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc9P09633 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Hoxc9P09633 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.22■□□□□ 0.67
Hoxc9P09633 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.22■□□□□ 0.67
Hoxc9P09633 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.22■□□□□ 0.67
Hoxc9P09633 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms