Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.16□□□□□ -0.14
ApoeP08226 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ApoeP08226 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.16□□□□□ -0.14
ApoeP08226 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
ApoeP08226 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.16□□□□□ -0.14
ApoeP08226 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ApoeP08226 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ApoeP08226 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.16□□□□□ -0.14
ApoeP08226 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ApoeP08226 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
ApoeP08226 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.15□□□□□ -0.14
ApoeP08226 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ApoeP08226 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Gm12497-201ENSMUST00000138778 237 ntBASIC14.15□□□□□ -0.14
ApoeP08226 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.15□□□□□ -0.14
ApoeP08226 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ApoeP08226 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ApoeP08226 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ApoeP08226 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ApoeP08226 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.15□□□□□ -0.14
ApoeP08226 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ApoeP08226 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ApoeP08226 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.14□□□□□ -0.15
ApoeP08226 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.14□□□□□ -0.15
ApoeP08226 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.14□□□□□ -0.15
ApoeP08226 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ApoeP08226 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.14□□□□□ -0.15
ApoeP08226 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ApoeP08226 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
ApoeP08226 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ApoeP08226 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ApoeP08226 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.14□□□□□ -0.15
ApoeP08226 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
ApoeP08226 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ApoeP08226 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms